Page - 123 - in Charge Transport in DNA - Insights from Simulations

B.5DistanceofChargedAtomGroups fromtheHelicalAxis Na+ Phosphate AA Full 1.491 1.021 Dry1 0.999 0.980 Dry2 0.883 0.892 AG Full 1.448 1.047 Dry1 0.962 1.000 Dry2 0.785 0.892 AT Full 1.513 1.069 Dry1 1.017 1.022 Dry2 0.912 0.947 GG Full 1.468 1.142 Dry1 0.940 1.025 Dry2 0.799 0.910 GC Full 1.423 1.007 Dry1 0.929 0.896 Dry2 0.841 0.817 GT Full 1.454 1.048 Dry1 0.968 1.012 Dry2 0.811 0.893 123 B.5 Distance ofChargedAtomGroups from theHelicalAxis TableB.9: Distance (in nm) of phosphate groups in theDNAbackbones and ofNa+ counterions fromthehelical axis ofDNA, in simulations ofDNAindiffer- ent environments.