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2.5ChargeTransport inDNA
G(E) = (E1−H−ΣL−ΣR)−1
(ΣL)lj = −iγLδl1δj1 (2.34)
(ΣR)lj = −iγRδlNδjN
Then, the instantaneous current can be obtainedwith the integration of the trans-
mission functionas
I(V)= 2e
h ·4γLγR · ∫ ∞
−∞ dE (
f (
E− eV
2 )
− f (
E+ eV
2 ))
|G1N(E)|2 (2.35)
with f being theFermi–Diracdistribution function.
To obtain single values for the instantaneous current, the converged limiting cur-
rent at the voltage of 2V,which is independent of the choice of the Fermi level,
was considered.
With theapplicationof this framework, two further conditions are assumed:
• theCT ispurely coherent,meaning thatpossible incoherent scatteringwould
bemissed [84]
• themotionof electrons is faster than themotionofnuclei.
These issues were addressed in Refs. [44, 45], where the methodology was de-
scribed in detail. Note that the aim here is not to compute quantitative current–
voltage characteristics, forwhichexplicit evaluationofFermienergies andaccount
of all states possibly contributing to conductance at the consideredvoltagewould
be required. Rather, themaximumcurrent at highvoltage is considered as a con-
venientmeasure of the ability of theDNA-basedmolecular system to support co-
herent CT. Actually, the CT parameters (electronic coupling (EC) and ionization
potential(IP)) are the key quantities determining the rate of CT proceeding with
anymechanism. Therefore, the obtained values ofmaximumcurrent can be con-
sidered tobe indicative for the efficiencyofCT ingeneral.
31
Charge Transport in DNA
Insights from Simulations
- Title
- Charge Transport in DNA
- Subtitle
- Insights from Simulations
- Author
- Mario Wolter
- Publisher
- KIT Scientific Publishing
- Date
- 2013
- Language
- English
- License
- CC BY-SA 3.0
- ISBN
- 978-3-7315-0082-7
- Size
- 17.0 x 24.0 cm
- Pages
- 156
- Keywords
- Charge Transport, Charge Transfer, DNA, Molecular Dynamics, Quantum Mechanics
- Categories
- Naturwissenschaften Chemie
Table of contents
- Zusammenfassung 1
- Summary 3
- 1 Introduction 5
- 2 TheoreticalBackground 11
- 3 SimulationSetup 39
- 4 DNAUnderExperimentalConditions 49
- 5 ChargeTransport inStretchedDNA 69
- 6 ChargeTransport inMicrohydratedDNA 79
- 7 AParametrizedModel toSimulateCT inDNA 89
- 8 Conclusion 105
- Appendix 111
- A DNAUnderExperimentalConditions 111
- B CTinMicrohydratedDNA 117
- List ofPublications 137